Duke University - Cell Biology and Biochemistry
mRNAs play a central role in eukaryotic cells; proper regulation of their maturation, translation, and degradation is essential for maintenance of the cellular proteome. A critical component of these steps is the partitioning of the mRNA transcriptome between two populations: those free in the cytosol and those bound to the endoplasmic reticulum (ER). In the Nicchitta lab, we aim to understand the systems and mechanisms that lead to the association of mRNAs with these cellular compartments. Using a broad array of tools drawn from biochemistry, cell biology, genomics, and computational biology, we focus on several related problems based on this central question.

We are working to establish the rules that govern association of mRNAs with the ER. One mechanism, in which a signal in the encoded protein leads to mRNA recruitment to the ER, has already been described. The identification and characterization of novel pathways of mRNA localization to the ER is a primary focus of the lab. We are particularly interested in understanding the mechanisms of ribosome-independent mRNA association with the ER and why such direct organelle targeting is utilized by distinct subsets of the mRNA transcriptome. In addition, we have discovered that the regulation of mRNA translation diverges between the cytosol and ER and we are working to both describe these differences and to explain their biochemical origins. Ultimately, we aim to understand the molecular principles operating to establish the subcellular architecture of protein expression and to test the hypothesis that the partitioning of mRNAs between the cytosol and ER represents a novel mechanism for the post-transcriptional regulation of gene expression.

 

436 Nanaline Duke
Duke University
Durham, NC 27708-0317

919-684-8948 (office)
919-684-8980 (lab)
Fax: 919-684-5481
Reid et al publish in Journal of Biological Chemistry.
Chen et al publish in Molecular Biology of the Cell.
Welcome Rebecca Poliner to the lab! Rebecca is an undergraduate biology major.
Suja Jagannathan, et. al., publish in Methods in Molecular Biology
Angela Jockheck-Clark, Ph.D., successfully defended her dissertation!
Angela Jockheck-Clark, et. al., publish in Journal of Immunology
Jason Maynard, Ph.D., successfully defended his dissertation!
Jason Maynard, et. al., publish in Devlopmental Biology

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